NAME

       density-score-by-residue - program to...

SYNOPSIS

       density-score-by-residue

DESCRIPTION

       density-score-by-residue is a part of the Coot suite of programs.

OPTIONS

       These  programs follow the usual GNU command line syntax, with long options starting with two dashes (-).
       A summary of options is included below.

       --pdbin=file
              Input PDB file name

       --hklin=file
              MTZ file containing structure factors

       --f=label
              label of MTZ file column containing structure factor amplitudes

       --phi=label
              label of MTZ file column containing structure factor phases

       --weight=label
              Label of weight column in MTZ file

       --score-atoms

       --cut  cut out badly scoring residues

       --cut-level=level
              Set (absolute) density level below which we can cut out residues

       --pdbout=file
              Output PDB file name

SEE ALSO

       bfactan(1), coot(1), findligand(1), findwaters(1), fix-nomenclature-errors(1), lidia(1).

AUTHOR

       density-score-by-residue is written by Paul Emsley.

       This manual page was written by Morten Kjeldgaard <mok@bioxray.dk>

                                                  January, 2011                      DENSITY-SCORE-BY-RESIDUE(1)